Publications


YEARSINSTITUTIONTITLEJOURNAL
2020Theragen BioAlteration in global DNA methylation status following preconditioning injury influences axon growth competence of the sensory neuronsExperimental Neurology
2020Theragen BioInhibition of TGF-β signaling in combination with nal-IRI plus 5-Fluorouracil/Leucovorin suppresses invasion and prolongs survival in pancreatic tumour mouse modelsScientific Reports
2020Theragen BioPathological manifestation of the iPSC-derived cortical neurons from an early-onset Alzheimer’s disease patient carrying a presenilin-1 mutation (S170F)Cell Proliferation
2020Theragen BioChanges in microbiome and metabolomic profiles of fecal samples stored with stabilizing solution at room temperature :a pilot study Scientific Reports
2020Theragen BioKRGDB: the large-scale variant database of 1722 Koreans based on whole genome sequencingDatabase
2020Theragen BioDevelopment of 18 Microsatellite Markers for Atractylodes japonica (Compositae)Applications in Plant Sciences
2020Theragen BioIs Hull Cleaning Wastewater a Potential Source of Developmental Toxicity on Coastal Non-Target Organisms?Aquatic Toxicology
2020Theragen BioDestablilization of TRAF6 by DRAK1 suppresses tumor growth and metastasis in cervical cancer cellsCancer Research
2020Theragen BioNeural stem cells derived from the developing forebrain of YAC128 mice exhibit pathological features of Huntington’s diseaseCell Proliferation
2020Theragen BioMutation Pattern Analysis of the Public SARS-Cov-2 Genome SequencesClinical Case Reports Journal
2020Theragen BioNeural Transplants From Human Induced Pluripotent Stem Cells Rescue the Pathology and Behavioral Defects in a Rodent Model of Huntington's DiseaseFrontiers in Neuroscience
2020Theragen BioFunctional Analysis of a Novel ABL (Abnormal Browning Related to Light) Gene in Mycelial Brown Film Formation of Lentinula edodesJ. Fungi
2020Theragen BioPerformance comparison of fecal preservative and stock solutions for gut microbiome storage at room temperatureJournal of Microbiology
2020Theragen BioLoss of wild-type p53 promotes mutant p53-driven metastasis through acquisition of survival and tumor-initiating propertiesNature Communications
2020Theragen BioIdentification of Genetic Factors Underlying the Association between Sodium Intake Habits and Hypertension RiskNutrients
2020Theragen BioLongitudinal Observation of Muscle Mass over 10 Years According to Serum Calcium Levels and Calcium Intake among Korean Adults Aged 50 and Older: The Korean Genome and Epidemiology StudyNutrients
2020Theragen BioEfficient and specific generation of knockout mice using Campylobacter Jejuni CRISPR/Cas9 systemBiochemistry and Biophysics Reports
2019Theragen BioValidation of Identified Susceptible Gene Variants for New-Onset Diabetes in Renal Transplant RecipientsJournal of Clinical Medicine
2019Theragen BioTheage distribution of facial metrics in two large Korean populationsScientific Reports
2019Theragen BioAssociation between the relative abundance of gastric microbiota and the risk of gastric cancer: a case-control studyScientific Reports
2019Theragen BioSerotonin receptor 3B polymorphisms are associated with type 2 diabetes: The Korean Genome and Epidemiology StudyDiabetic Research and Clinical Practice
2019Theragen BioComparative transcriptome analysis identified candidate genes involved in mycelium browning in entinula edodesBMC Genomics
2019Theragen BioTaF: a web platform for taxonomic profile-based fungal gene predictionGenes & Genomics
2019Theragen BioOverlapping and unique toxic effects of three alternative antifouling

biocides (Diuron, Irgarol 1051®, Sea-Nine 211®) on non-target marine fish
Ecotoxicology and Environmental Safety
2019Theragen BioAn effective and rapid method for RNA preparation from
non-conventional yeast species
Analytical Biochemistry
2018Theragen BioMicrobial acclimatization to lipidic–waste facilitates the efficacy of acidogenic fermentationChemical Engineering Journal
2018Theragen BioData on transcriptome profiling of circulating microRNAs in dairy cattleData in Brief
2018Theragen BioSimultaneous detection of barrier and immunerelated gene variations in patients with atopic dermatitis by reverse blot hybridization assayClinical and Experimental Dermatology
2018Theragen BioMetabolic influence of walnut phenolic extract on mitochondria in a colon cancer stem cell modelEuropean Journal of Nutrition
2018Theragen BioIdentification of Epithelial-Mesenchymal Transition-related Target Genes Induced by the Mutation of Smad3 Linker PhosphorylationJournal of Cancer Prevention
2018Theragen BioRepurposing the Cord Blood Bank for Haplobanking of HLAHomozygous iPSCs and Their Usefulness to Multiple PopulationsStem Cells
2018Theragen BioGenome-wide transcriptomic analysis of BR-deficient
Micro-Tom reveals correlations between drought stress tolerance and
brassinosteroid signaling in tomato
Plant Physiology and Biochemistry
2018Theragen BioSuccessful application of human-based methyl capture sequencing for methylome analysis in non-human primate modelsBMC Genomics
2018Theragen BioGenomic Analyses Revealed Radiation-induced Glioblastoma in a Subset of Recurrent Medulloblastoma (IF: 12.21)Acta Neuropathologica
2018Theragen BioGenome-wide identification of InDel markers from imported Rice varietiesAgronomy
2018Theragen BioIdentification of transposable elements fused in the exonic region of the olive flounder genomeGenes and Genomics
2018Theragen BioCombined Mutation of Apc, Kras, and Tgfbr2 Effectively Drives Metastasis of Intestinal CancerCancer Research
2018Theragen BioFirst Investigation of Microbial Community Composition in a
Bridge (Gadeok Channel) between Jinhae-Masan Bay and South Sea, Korea
Ocean Science Journal
2018Theragen BioProfiling and identification of pregnancy-associated microRNAs to detect early pregnancy in dairy cattleGenes and Genomics
2018Theragen BioTemperature-dependent immune response of olive flounder (Paralichthys olivaceus) infected with viral hemorrhagic septicemia virus (VHSV)Genes and Genomics
2018Theragen BioTranscriptome analysis of olive flounder (Paralichthys
olivaceus) head kidney infected with moderate and high virulent strains of
infectious viral hemorrhagic septicaemia virus (VHSV)
Fish and Shellfish Immunilogy
2018Theragen BioInteractions among the variants of insulin-related genes and
nutrients increase the risk of type 2 diabetes
Nutrition Research
2018Theragen BioAn efficient and tunable parameter to improve variant calling for whole genome and exome sequencing dataGenes and Genomics
2018Theragen BioGene expression profiles alteration after infection of virus, bacteria, and
parasite in the Olive flounder (Paralichthys olivaceus)
Scientific Reports
2017Theragen BioIsoform Sequencing Provides a More Comprehensive View of the Panax ginseng
Transcriptome
Genes
2017Theragen BioLong-read transcriptome data for improved gene prediction in Lentinula edodesData in Brief
2017Theragen BioDevelopment of Genome-Wide SSR Markers from Angelica gigas Nakai Using Next Generation SequencingGenes
2017Theragen BioRecapitulation of Genome-wide Association Study on Chronic Periodontitis in a Korean PopulationBiomedical Science Letters
2017Theragen BioTotal serum bilirubin and 8-year incident type 2 diabetes
mellitus: The Korean Genome and Epidemiology Study
Diabetes & Metabolism
2017Theragen BioAssociation of PD-L1 expression with tumor-infiltrating immune cells and mutation burden in the high-grade neuroendocrine carcinoma of the lungJournal of Thoracic Oncology
2017Theragen BioSimultaneous detection of barrier- and immune-related gene variations in patients with atopic dermatitis by reverse blot hybridization assayClinical and Experimental Dermatology
2017Theragen BioComprehensive Transcriptome Profiling of Balding and
Non-Balding Scalps in Trichorhinophalangeal Syndrome Type I Patient
Annals of dermatology
2017Theragen BioIdentification of novel candidate variants including COL6A6
polymorphisms in early-onset atopic dermatitis using whole-exome sequencing
BMC medical Genomics
2017Theragen BioaccD nuclear transfer of Platycodon grandiflorum and the plastid of early CampanulaceaeBMC Genomics
2017Theragen BioPathway profiles based on gene-set enrichment analysis in the honey bee Apis mellifera under brood rearing-suppressed conditionsGenomics
2017Theragen BioIntegrated analysis of leaf morphological and color traits
in different populations of Chinese cabbage (Brassica rapa ssp. pekinensis)
Theoretical and Applied Genetics
2017Theragen BioFunctional Characterization of the β-amyrin Synthase Gene Involved in Platycoside Biosynthesis from in Platycodon grandiflorumHorticulture, Environment, and Biotechnology
2017Theragen BioThe Whole-Genome and Transcriptome of the Manila Clam (Ruditapes philippinarum)Genome Biology and Evolution
2017Theragen BioDevelopment of 44 Novel Polymorphic SSR Markers for Determination of Shiitake Mushroom (Lentinula edodes) CultivarsGenes
2017Theragen BioUse of whole-exome sequencing to determine the genetic basis of signs of skin youthfulness in Korean womenJournal of the European Academy of Dermatology and Venereology
2017Theragen BioBarcode System for Genetic Identification of Soybean
[Glycine max (L.) Merrill] Cultivars Using InDel Markers Specific to Dense Variation Blocks
Frontiers in Plant Science
2017Theragen BioRNA seq- and DEG-based comparison of developmental toxicity
in fish embryos of two species exposed to Iranian heavy crude oil
Comparative Biochemistry and Physiology - Part C: Toxicology & Pharmacology
2016Theragen BioDysregulation JAK2 expression by TrkC promotes metastasis potential, and EMT program of metastatic breast cancerScientific Reports
2016Theragen BioTranscriptome Profiling and In Silico Analysis of the Antimicrobial Peptides of the Grasshopper Oxya chinensis sinuosaJournal of Microbiology and Biotechnology
2016Theragen BioStage-Wise Identification and Analysis of miRNA from Root-Knot Nematode Meloidogyne incognitaInternational Journal of Molecular Sciences
2016Theragen BioEfficient generation of transgenic cattle using the DNA transposon and their analysis by next-generation sequencingScientific Reports
2016Theragen BioAberrantly expressed microRNAs in the context of bladder
tumorigenesis
Investigative and Clinical Urology
2016Theragen BioSingle nucleotide polymorphisms in exomes of high- and low-marbled meats in Korean cattleAnimal Genetics
2016Theragen BioWhole‑genome de novo sequencing, combined with RNA‑Seq analysis, reveals unique genome and physiological features of the amylolytic yeast Saccharomycopsis fibuligera and its interspecies hybridBiotechnology for Biofuels
2016Theragen BioWhole genome de novo seqeuncing and genome annotation of the world popular cultivated edible mushroom, lentinula eddoesJournal of Biotechnology
2016Theragen BioWhole Genome Re-Sequencing of Three Domesticated Chicken BreedsBio One
2016Theragen BioTrans-ancestry genome-wide association study identifies 12 genetic loci influencing blood pressure and implicates a role for DNA methylationNature Genetics
2015Theragen BioObesity Alters the Microbial Community Profile in Korean AdolescentsPLoS One
2015Theragen BioGene structure variation in segmental duplication block C of human chromosome 7q 11.23 during primate evolutionGene
2015Theragen BioIdentification of genomic mutations associated with clinical
outcomes of induction chemotherapy in patients with head and neck squamous
cell carcinoma
Journal of Cancer Research and Clinical Oncology
2015Theragen BioHEpD: A database describing epigenetic differences between Thoroughbred and Jeju horsesGene
2015Theragen BioGenome-Wide Analysis of DNA Methylation beforeand after Exercise in the Thoroughbred Horse with MeDIP-Seq (IF: 13.958)Molecules and Cells
2015Theragen BioTrans-ancestry genome-wide association study identifies 12 genetic loci influencing blood pressure and implicates a role for DNA methylation (IF: 27.959)Nature Genetics
2015Theragen BioSLC15A2 genomic variation is associated with the extraordinary response of sorafenib treatment: whole-genome analysis in patients with hepatocellular carcinomaOncotarget
2015Theragen BioIdentification of a possible susceptibility locus for UVB-induced skin tanning phenotype in Korean females using genomewide association studyExperimental Dermatology
2015Theragen BioGenomewide association study on chronic periodontitis in Korean population: results from the Yangpyeong health cohort.Journal of Clinical Periodontology
2015Theragen BioWhole genome sequencing of an ethnic Pathan (Pakhtun) from the north-west of PakistanBMC Genomics
2015Theragen BioAncient Ethiopian genome reveals extensive Eurasian admixture in Eastern Africa (IF: 37.205)Science
2015Theragen BioGlobal Profiling of Various Metabolites in Platycodon grandiflorum by UPLC-QTOF/MSInternational Journal of Molecular Sciences
2015Theragen BioIdentification of a possible susceptibility locus for UVB-induced skin tanning phenotype in Korean females using genome-wide association studyExperimental Dermatology
2014Theragen BioGenome-Wide Identification and Classification of MicroRNAs Derived from Repetitive ElementsGenomics
& Informatics
2014Theragen BioIdentification and Characterization of MicroRNAs in Normal Equine Tissues by Next Generation SequencingPLOS ONE
2014Theragen BioWhole-Genome Analyses of Korean Native and Holstein Cattle Breeds by Massively Parallel SequencingPLOS ONE
2014Theragen BioComparison of targeted next generation sequencing with conventional sequencing for predicting responsiveness to epidermal groqth factor receptor-tyrosine kinase inhibitor(EGFR-TJI) therapy in never-smokers with lung adenocarcinomaLung Cancer
2014Theragen BioNew lung cancer panel for high-throughput targeted resequencingGenomics & Informatics
2014Theragen BioThe feasibility study of non-invasive fetal trisomy 18 and 21 detection with semiconductor sequencing platformPLoS ONE
2014Theragen Bio/Genome Research FoundationWhole-genome analysis of a patient with early-stage small-cell lung cancerPharmacogenomics Journal
2014Theragen Bio/Genome Research FoundationMinke whale genome and aquatic adaptation in cetaceans (IF: 27.959)Nature Genetics
2014Theragen Bio/Genome Research FoundationVariation block-based genomics method for crop plants.BMC Genomics
2013Theragen Bio/Genome Research FoundationThe tiger genome and comparative analysis with lion and snow leopard genomes. (IF: 12.353)Nature Communications
2013Theragen Bio/Genome Research FoundationWhole genome comparison of donor and cloned dogs.Scientific Reports
2013Theragen BioGalaxyGemini: A web server for protein homo-oligomer structure prediction based on similarityBioinformatics
2013Theragen BioIAnn: An event sharing platform for the life sciencesBioinformatics
2013Theragen BioA genome-wide association study in koreans identifies susceptibility loci for
allergic nickel dermatitis
International Archives of Allergy and Immunology
2013Theragen Bio/Genome Research FoundationThe tiger genome and comparative analysis with lion and snow leopard genomes (IF: 12.353)Nature Communications
2013Genome Research
Foundation
PPP1R1B-STARD3 chimeric fusion transcript in human gastric cancer promotes tumorigenesis through activation of PI3K/AKT signalingOncogene
2013Genome Research
Foundation
Genetic identification of a novel locus, ACCELERATED FLOWERING 1 that controls chromatin modification associated with histone H3 lysine 27 trimethylation in Arabidopsis thalianaPlant Science
2013Genome Research
Foundation
Comprehensive genome- and transcriptome-wide analyses of mutations associated with microsatellite instability in Korean gastric cancers (IF: 10.101)Genome Research
2013Genome Research
Foundation
The genetic basis of white tigersCurrent Biology
2013Genome Research
Foundation
Characterization of functional variants in 33 blood pressure loci using 1000 genomes project dataGenes and Genomics
2013Genome Research
Foundation
Peeling back the evolutionary layers of molecular mechanisms responsive to exercise-stress in the skeletal muscle of the racing horseDNA Research
2012Theragen Bio/Genome Research FoundationMetaBase - The wiki-database of biological databases (IF: 11.561)Nucleic Acids Research
2012Theragen BioKorea Barcode of Life Database System (KBOL)Animal Cells and Systems
2012Theragen BioDe novo transcriptome sequencing of Momordica cochinchinensis to identify genes involved in the carotenoid biosynthesisPlant Molecular Biology
2012Theragen Bio/Genome Research FoundationA public resource facilitating clinical use of genomesPNAS
2012Theragen Bio/Genome Research FoundationWhole transcriptome analyses of six thoroughbred horses before and after exercise using RNA-SeqBMC Genomics
2012Theragen BioLow budget analysis of Direct-To-Consumer genomic testing familial dataF1000Research
2011Theragen BioMolecular inflammation as an underlying mechanism of the
aging process and age-related diseases
Journal of Dental Research
2011Theragen BioLiverome: A curated database of liver cancer-related gene signatures with self-contained context informationBMC Genomics
2011Genome Research FoundationComprehensive long-span paired-end-tag mapping reveals characteristic patterns of structural variations in epithelial cancer genomesGenome Research
2011Theragen BioA proposal for the revision of molecular boundary typology.Journal of Biomolecular Structure and Dynamics
2011Theragen BioMutational hotspotsin the mitochondrial genome of lung cancer.Biochem Biophys Res Communications
2011Theragen Bio/Genome Research
Foundation
PanSNPdb:the Pan-Asian SNP genotyping database.PLoS One
2011Theragen BioGene expression pattern in transmitochondrial cytoplasmic hybrid cells harboringtype 2 diabetes-associated mitochondrial DNA haplogroups.PLoS One
2011Theragen BioBetaDock:shape-priority docking method based on beta-complex.Journal of Biomolecular Structure and Dynamics
2011Theragen BioHow Many SNPs Should Be Used for the Human Phylogeny of
Highly Related Ethnicities? A Case of Pan Asian 63 Ethnicities
Genomics & Informatics
2010Genome Research FoundationWhole-genome sequencing and intensive analysis of the undomesticated soybean (Glycine soja Sieb. and Zucc.) genomeProceedings of the National Academy of Sciences of the United States of America
2010Theragen BioSystematic cyanobacterial membrane proteome analysis by combining acid hydrolysis and digestive enzymes with nano-liquid chromatography-Fourier transform mass spectrometry.J Chromatogr A
2010Theragen BioPDBWiki: added value through community annotation of the
Protein Data Bank.
Database